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Image Search Results
Journal: Cell chemical biology
Article Title: Divergent JNK Phosphorylation of HDAC3 in Triple Negative Breast Cancer Cells Determines HDAC Inhibitor Binding and Selectivity
doi: 10.1016/j.chembiol.2017.08.015
Figure Lengend Snippet: A) Western blot analysis of MCF-7 cells labeled in situ with photomate (lane 1 and 4), photomate and SAHA (lane 3 and 5) or DMSO (lane 6), reacted with biotin azide tag, and enriched with streptavidin coated magnetic beads. Blot shows enriched fraction eluted off beads and 2.5% of input recognized by anti-HDAC1, 2 and 3 antibodies. B) Graph of the abundance of each class I HDAC in MCF-7 cells quantified by comparison of MCF-7 lysate to a standard curve of each recombinant class I HDACs; visualized by Western blot (Figure S1). C) MS/MS analysis of photomate enriched fractions, as in A). Pie chart on the right shows total number of proteins identified by MS/MS and the number that were specifically enriched when compared to a DMSO control and were decreased by at least 50% when co-treated with SAHA. On the left, bioinformatic annotation of enriched proteins. All specifically enriched proteins are shown in Table S1. D) Gel based visualization of MCF-7 cells labeled with photomate in situ followed by fractionation into cytosol (right) and nucleus (left). Probe staining is shown above, and antibody recognition of the same gel is shown below. Gels are in grey scale for clarity. E) Western blot analysis of HDAC3 co-immunoprecipitates. MDA-MB-231 cells, or MCF-7 cells were lysed and enriched with polyclonal anti-HDAC3 (Abcam) or rabbit IgG protein A bead conjugates (Lanes 2 and 3 respectively). Eluates were analyzed by western blot along with 10% of Input (Lane 1) and blotted with antibodies for complex components. F) Small interfering RNA knockdown of NCOR1 in MCF-7 cells. MCF-7 cells were transfected with siNCOR1 or siControl, followed by labeling with photomate and electrophoretic separation. Antibody recognition of transfected cells is shown above, followed by gel based visualization of photomate engagement of HDAC1and HDAC3 below. Cells were either incubated with photomate (Lane 1) or photomate and excess SAHA (Lane 2) after transfection. All results are representative of at least 3 independent experiments.
Article Snippet:
Techniques: Western Blot, Labeling, In Situ, Magnetic Beads, Comparison, Recombinant, Tandem Mass Spectroscopy, Control, Fractionation, Staining, Small Interfering RNA, Knockdown, Transfection, Incubation
Journal: Cell chemical biology
Article Title: Divergent JNK Phosphorylation of HDAC3 in Triple Negative Breast Cancer Cells Determines HDAC Inhibitor Binding and Selectivity
doi: 10.1016/j.chembiol.2017.08.015
Figure Lengend Snippet: KEY RESOURCES TABLE
Article Snippet:
Techniques: Virus, Recombinant, Protease Inhibitor, Bicinchoninic Acid Protein Assay, Software, Blocking Assay